Index

A

alpha (kipe.roukf.SigmaPointStencil attribute) arguments (kipe.options.ForwardSolverOptions attribute)

ArraySampler (class in kipe.sampling) ArraySamplingOptions (class in kipe.options)

B

build_forward_solver() (in module kipe.forward_solver) build_mesh_sampler() (in module kipe.fenicsx.sampling) build_model() (in module kipe.measurements)

build_observation_operator() (in module kipe.measurements) build_parameterization() (in module kipe.parameters) build_point_sampler() (in module kipe.fenicsx.points) build_sampler() (in module kipe.sampling)

C

CheckpointsTruthOptions (class in kipe.options)

covariance() (kipe.roukf.FilterState method)

D

data (kipe.options.MeasurementOptions attribute) data_path() (in module kipe.options) describe_function_space() (in module kipe.fenicsx.forward_solver)

DifferenceModel (class in kipe.measurements) DifferenceModelOptions (class in kipe.options) dump_study() (in module kipe.options)

E

Element (in module kipe.fenicsx.sampling) element (kipe.options.MeshSamplingOptions attribute) estimate() (in module kipe.estimation) EstimatedParameter (class in kipe.parameters)

Estimation (class in kipe.estimation) estimation (kipe.options.StudyOptions attribute) estimation_directory() (in module kipe.options) EstimationOptions (class in kipe.options)

F

factory (kipe.options.ForwardSolverOptions attribute) fields (kipe.measurements.ObservationOperator attribute) (kipe.options.MeasurementOptions attribute) FieldSpec (class in kipe.examples.fitzhugh_nagumo) (class in kipe.fenicsx.examples.heat) (class in kipe.forward_solver)

FilterState (class in kipe.roukf) forward_solver (kipe.options.StudyOptions attribute) ForwardSolver (class in kipe.forward_solver) ForwardSolverError ForwardSolverOptions (class in kipe.options) function_space() (kipe.fenicsx.examples.heat.Solver method) (kipe.fenicsx.forward_solver.SupportsFunctionSpaces method)

G

gain() (in module kipe.roukf) git_state() (in module kipe.provenance)

global_indices (kipe.measurements.ObservationOperator property) (kipe.sampling.SpatialSampler attribute)

H

History (class in kipe.plot)

I

initial (kipe.options.ParameterPrior attribute) (kipe.parameters.EstimatedParameter attribute) initial_state() (in module kipe.roukf) (kipe.examples.fitzhugh_nagumo.Solver method) (kipe.fenicsx.examples.heat.Solver method) (kipe.forward_solver.ForwardSolver method) initial_theta() (kipe.parameters.EstimatedParameter method) (kipe.parameters.Parameterization method)

innovation() (kipe.measurements.DifferenceModel method) (kipe.measurements.MeasurementModel method) iteration (kipe.plot.History attribute) iteration_starts() (kipe.plot.History method) iterations (kipe.options.EstimationOptions attribute) (kipe.plot.History attribute)

K

kind (kipe.examples.fitzhugh_nagumo.FieldSpec attribute) (kipe.fenicsx.examples.heat.FieldSpec attribute) (kipe.forward_solver.FieldSpec property) kipe module kipe.cli module kipe.estimation module kipe.examples module kipe.examples.fitzhugh_nagumo module kipe.fenicsx module kipe.fenicsx.examples module kipe.fenicsx.examples.heat module kipe.fenicsx.forward_solver module

kipe.fenicsx.points module kipe.fenicsx.sampling module kipe.forward_solver module kipe.measurements module kipe.options module kipe.parameters module kipe.plot module kipe.provenance module kipe.roukf module kipe.sampling module kipe.synthesis module

L

L_theta (kipe.roukf.FilterState attribute) L_x (kipe.roukf.FilterState attribute) load_study() (in module kipe.options) local_size (kipe.examples.fitzhugh_nagumo.FieldSpec attribute) (kipe.fenicsx.examples.heat.FieldSpec attribute) (kipe.forward_solver.FieldSpec property)

log_level (kipe.options.OutputOptions attribute) lower (kipe.plot.History attribute)

M

main() (in module kipe.cli) mean() (in module kipe.roukf) Measurement (class in kipe.measurements) measurement_times() (in module kipe.measurements) MeasurementModel (class in kipe.measurements) MeasurementOptions (class in kipe.options) measurements (kipe.options.StudyOptions attribute) mesh (kipe.options.MeshSamplingOptions attribute) mesh_name (kipe.options.MeshSamplingOptions attribute) MeshSampler (class in kipe.fenicsx.sampling) MeshSamplingOptions (class in kipe.options) model (kipe.measurements.ObservationOperator attribute) (kipe.options.MeasurementOptions attribute) module kipe kipe.cli kipe.estimation kipe.examples kipe.examples.fitzhugh_nagumo kipe.fenicsx kipe.fenicsx.examples kipe.fenicsx.examples.heat kipe.fenicsx.forward_solver kipe.fenicsx.points kipe.fenicsx.sampling kipe.forward_solver kipe.measurements kipe.options kipe.parameters kipe.plot kipe.provenance kipe.roukf kipe.sampling kipe.synthesis

N

name (kipe.measurements.Measurement attribute) (kipe.parameters.EstimatedParameter attribute) names (kipe.parameters.Parameterization property) (kipe.plot.History attribute) NDArray_f64 (in module kipe.examples.fitzhugh_nagumo) (in module kipe.fenicsx.examples.heat)

noise (kipe.options.MeasurementOptions attribute) (kipe.options.SynthesisOptions attribute) NoiseOptions (class in kipe.options) nominal_parameters() (kipe.examples.fitzhugh_nagumo.Solver method) (kipe.fenicsx.examples.heat.Solver method) (kipe.forward_solver.ForwardSolver method) NumpyDataOptions (class in kipe.options)

O

ObservationOperator (class in kipe.measurements) observed_function_space() (in module kipe.fenicsx.sampling) one_sigma_range() (kipe.parameters.Parameterization method)

operator (kipe.measurements.Measurement attribute) output (kipe.options.StudyOptions attribute) OutputOptions (class in kipe.options)

P

p_alpha() (kipe.roukf.SigmaPointStencil method) padding (kipe.options.MeshSamplingOptions attribute) Parameterization (class in kipe.parameters) ParameterPrior (class in kipe.options) Parameters (in module kipe.examples.fitzhugh_nagumo) (in module kipe.fenicsx.examples.heat) (in module kipe.forward_solver) parameters (kipe.options.StudyOptions attribute) (kipe.parameters.Parameterization attribute) (kipe.plot.History attribute) ParametersOptions (class in kipe.options) path (kipe.options.CheckpointsTruthOptions attribute) (kipe.options.NumpyDataOptions attribute) (kipe.options.OutputOptions attribute)

physical_range() (kipe.parameters.Parameterization method) plot_histories() (in module kipe.plot) PlotError points (kipe.options.PointSamplingOptions attribute) (kipe.roukf.SigmaPointStencil attribute) PointSampler (class in kipe.fenicsx.points) PointSamplingOptions (class in kipe.options) predict() (kipe.measurements.DifferenceModel method) (kipe.measurements.MeasurementModel method) Projection (in module kipe.fenicsx.sampling) projection (kipe.options.MeshSamplingOptions attribute) propagate() (kipe.examples.fitzhugh_nagumo.Solver method) (kipe.fenicsx.examples.heat.Solver method) (kipe.forward_solver.ForwardSolver method)

R

read_checkpoint() (kipe.forward_solver.SupportsCheckpoints method) read_history() (in module kipe.plot) read_numpy() (in module kipe.measurements) realizations (kipe.options.SynthesisOptions attribute) recenter() (kipe.parameters.Parameterization method) recorded_run() (in module kipe.provenance) relative_stddev (kipe.options.ParameterPrior attribute)

render_histories() (in module kipe.plot) Reparameterization (in module kipe.options) reparameterization (kipe.options.ParameterPrior attribute) (kipe.options.ParametersOptions attribute) (kipe.parameters.EstimatedParameter attribute) run() (kipe.estimation.Estimation method) RunTruthOptions (class in kipe.options)

S

sample() (in module kipe.roukf) (kipe.fenicsx.points.PointSampler method) (kipe.fenicsx.sampling.MeshSampler method) (kipe.sampling.ArraySampler method) (kipe.sampling.SpatialSampler method) sampler (kipe.measurements.ObservationOperator attribute) seed (kipe.options.NoiseOptions attribute) select (kipe.options.ParametersOptions attribute) sensitivity() (in module kipe.roukf) sigma_point_stencil() (in module kipe.roukf) sigma_points (kipe.options.EstimationOptions attribute) SigmaPoints (in module kipe.options) SigmaPointStencil (class in kipe.roukf) size (kipe.measurements.ObservationOperator property) (kipe.sampling.SpatialSampler attribute) Solver (class in kipe.examples.fitzhugh_nagumo) (class in kipe.fenicsx.examples.heat) spatial_sampling (kipe.options.MeasurementOptions attribute) SpatialSampler (class in kipe.sampling) SpatialSamplingOptions (in module kipe.options) start (kipe.options.TimeRange attribute) State (in module kipe.examples.fitzhugh_nagumo) (in module kipe.fenicsx.examples.heat) (in module kipe.forward_solver)

state_spec (kipe.examples.fitzhugh_nagumo.Solver property) (kipe.fenicsx.examples.heat.Solver property) (kipe.forward_solver.ForwardSolver property) stddev (kipe.measurements.Measurement attribute) (kipe.options.NoiseOptions attribute) (kipe.options.ParameterPrior attribute) (kipe.options.SynthesisNoiseOptions attribute) stddev_theta (kipe.parameters.EstimatedParameter attribute) stddev_theta() (kipe.parameters.Parameterization method) step (kipe.options.TimeRange attribute) steps (kipe.plot.History property) steps_per_iteration (kipe.plot.History attribute) stop (kipe.options.TimeRange attribute) study_schema() (in module kipe.options) StudyFileError StudyOptions (class in kipe.options) SupportsCheckpoints (class in kipe.forward_solver) SupportsFunctionSpaces (class in kipe.fenicsx.forward_solver) synthesis (kipe.options.StudyOptions attribute) SynthesisNoiseOptions (class in kipe.options) SynthesisOptions (class in kipe.options) synthesize() (in module kipe.synthesis)

T

theta (kipe.roukf.FilterState attribute) TimeRange (class in kipe.options) times (kipe.measurements.Measurement attribute) (kipe.options.MeasurementOptions attribute) to_physical() (kipe.parameters.EstimatedParameter method) (kipe.parameters.Parameterization method) truth (kipe.options.SynthesisOptions attribute)

TruthOptions (in module kipe.options) type (kipe.options.ArraySamplingOptions attribute) (kipe.options.CheckpointsTruthOptions attribute) (kipe.options.DifferenceModelOptions attribute) (kipe.options.MeshSamplingOptions attribute) (kipe.options.NumpyDataOptions attribute) (kipe.options.PointSamplingOptions attribute) (kipe.options.RunTruthOptions attribute)

U

U_inv (kipe.roukf.FilterState attribute)

update() (in module kipe.roukf) upper (kipe.plot.History attribute)

V

values (kipe.measurements.Measurement attribute)

W

watch_histories() (in module kipe.plot)

write_numpy() (in module kipe.measurements)

X

x (kipe.roukf.FilterState attribute)